Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs6931046 chr6:26880887 C/T 6.89E-9 172 22.57 21.97 4.5 KM Plot
UCEC rs7011819 chr8:66567831 G/A 1.42E-11 171 4.33 22.7 22.63 KM Plot
UCEC rs7090120 chr10:88720997 G/A 5.75E-5 172 23.57 23.47 18.6 KM Plot
UCEC rs7091084 chr10:88721024 C/T 4.21E-6 172 22.8 23.97 18.57 KM Plot
UCEC rs7111183 chr11:33097339 C/G 0.000138 173 22.12 22.88 18.47 KM Plot
UCEC rs7111387 chr11:33097336 G/A 0.000138 173 22.12 22.88 18.47 KM Plot
UCEC rs7119801 chr11:56911242 C/T 9.49E-5 174 18.78 26.17 22.57 KM Plot
UCEC rs7121684 chr11:62162389 T/C 1.89E-11 169 22.57 26.9 4.33 KM Plot
UCEC rs71331211 chr22:30129967 T/C 6.96E-12 173 22.8 19.53 4.33 KM Plot
UCEC rs71412057 chr14:22317194 T/C 5.74E-5 168 21.6 22.38 11.53 KM Plot
UCEC rs714241 chr14:73700667 A/T 4.61E-7 174 22.57 27.05 10.33 KM Plot
UCEC rs71478972 chr11:11551130 C/T 3.04E-5 169 22.63 24.07 4.33 KM Plot
UCEC rs71729997 chr22:50306521 G/GA 2.17E-5 171 22.75 20.93 16.55 KM Plot
UCEC rs7173765 chr15:84764510 C/T 5.71E-11 172 22.67 27.43 7.95 KM Plot
UCEC rs7194763 chr16:30837605 C/T 8.43E-9 171 4.5 17.97 23.23 KM Plot